muon.prot.pp.clr
muon.prot.pp.clr#
- muon.prot.pp.clr(adata: anndata._core.anndata.AnnData, inplace: bool = True, axis: int = 0) Union[None, anndata._core.anndata.AnnData] #
Apply the centered log ratio (CLR) transformation to normalize counts in adata.X.
- Parameters
data – AnnData object with protein expression counts.
inplace – Whether to update adata.X inplace.
axis – Axis across which CLR is performed.