muon.atac.tl.initialise_default_files

muon.atac.tl.initialise_default_files(data: AnnData | MuData, path: str | Path)

Locate default files for ATAC-seq

• attempt to locate peak annotation file (atac_peak_annotation.tsv)

• attempt to parse add peak annotation and store it as a DataFrame

• attempt to locate fragments file (atac_fragments.tsv.gz)