muon.pp

muon.pp#

Functions

filter_obs(data, var[, func])

Filter observations (samples or cells) in-place using any column in .obs or in .X.

filter_var(data, var[, func])

Filter variables (features, e.g. genes) in-place using any column in .var or row in .X.

intersect_obs(mdata)

Subset observations (samples or cells) in-place taking observations present only in all modalities.

l2norm(mdata[, mod, rep, n_pcs, copy])

Normalize observations to unit L2 norm.

neighbors(mdata[, n_neighbors, ...])

Multimodal nearest neighbor search.

sample_obs(data[, frac, groupby, min_n])

Return an object with some of the observations (subsampling).